Index

A B C D E F G H I J K L M N O P Q R S T U V W Z
All Classes and Interfaces|All Packages|Constant Field Values|Serialized Form

R

random(int, int) - Static method in class edu.claflin.finder.algo.clustering.struct.leading_eigenvector_struct.Matrix

Generate matrix with random elements

randomPath - Variable in class edu.claflin.finder.algo.clustering.struct.infomap_struct.AvgBitLength

randomWalker(Graph) - Static method in class edu.claflin.finder.algo.clustering.struct.infomap_struct.AvgBitLength

Generates a path taken by random walker.

rChild(int) - Method in class edu.claflin.finder.algo.clustering.struct.girvan_newman_struct.MapBinaryHeap

read(BufferedReader) - Static method in class edu.claflin.finder.algo.clustering.struct.leading_eigenvector_struct.Matrix

Read a matrix from a stream.

readManifest(File) - Static method in class edu.claflin.finder.io.ManifestParser

Reads the manifest file.

rebuildHeap(int) - Method in class edu.claflin.finder.algo.clustering.struct.fast_greedy_struct.SparseMatrix

Rebuild heap j with the tree j

RelativeUndirectedBitLength - Class in edu.claflin.finder.algo.clustering.struct.infomap_struct

RelativeUndirectedBitLength(Graph, Map<Node, Integer>) - Constructor for class edu.claflin.finder.algo.clustering.struct.infomap_struct.RelativeUndirectedBitLength

relativeWeights - Variable in class edu.claflin.finder.algo.clustering.struct.infomap_struct.RelativeUndirectedBitLength

remove() - Method in class edu.claflin.finder.algo.clustering.struct.girvan_newman_struct.MapBinaryHeap

remove(Object) - Method in class edu.claflin.finder.algo.clustering.struct.girvan_newman_struct.MapBinaryHeap

remove(T) - Method in class edu.claflin.finder.algo.clustering.struct.BinarySearchTree

remove(T, TreeNode<T>) - Method in class edu.claflin.finder.algo.clustering.struct.BinarySearchTree

remove_node(HeapNodeWT, PriorityQueue<HeapNodeWT>) - Method in class edu.claflin.finder.algo.clustering.Walktrap

Remove a HeapNode from the Queue.

removeAll(Collection<?>) - Method in class edu.claflin.finder.algo.clustering.struct.girvan_newman_struct.MapBinaryHeap

removeBoolean(String) - Method in class edu.claflin.finder.algo.ArgumentsBundle

Removes a boolean from the booleanList.

removeCondition(Condition) - Method in class edu.claflin.finder.algo.ArgumentsBundle

Removes a Condition from the conditionsList.

removeCondition(Condition) - Method in class edu.claflin.finder.logic.ConditionedGraph

Removes a condition from the graph.

removeDouble(String) - Method in class edu.claflin.finder.algo.ArgumentsBundle

Removes a double from the doubleList.

removeEdge(Edge) - Method in class edu.claflin.finder.logic.Graph

removeEdge(Edge) - Method in class edu.claflin.finder.logic.Node

removeEdgesInPartiteSet(Graph, List<Node>) - Method in class edu.claflin.finder.algo.BronKerbosch

Removes edges in a Graph between all Nodes in a partite set.

removeEdgesInvolving(Node) - Method in class edu.claflin.finder.logic.Graph

Remove all the edges in which the given Node participates.

removeEnum(String) - Method in class edu.claflin.finder.algo.ArgumentsBundle

Removes an enum from the enumList.

removeFromTree(int, int) - Method in class edu.claflin.finder.algo.clustering.struct.fast_greedy_struct.SparseMatrix

removeInteger(String) - Method in class edu.claflin.finder.algo.ArgumentsBundle

Removes an integer from the integerList.

removeMember(Node) - Method in class edu.claflin.finder.algo.clustering.struct.infomap_struct.ModuleNode

removeNode(Node) - Method in class edu.claflin.finder.logic.Graph

Removes a node from the set.

removeObject(String) - Method in class edu.claflin.finder.algo.ArgumentsBundle

Removes an object from the enumList.

removePaths(Graph, Node, Node) - Method in class edu.claflin.finder.algo.shortestpath.ShortestPath

Private class for removing visited paths that not reach the destination node.

removePropertyChangeListener(PropertyChangeListener) - Method in class edu.claflin.finder.algo.Algorithm

Removes a PropertyChangeListener.

replaceNodes(List<IndexedHeapNode>) - Method in class edu.claflin.finder.algo.clustering.struct.fast_greedy_struct.IndexedHeapQueue

Replace nodes in the queue with their counterparts in a given list, according to row number (i).

reportProblem(String, String) - Method in class edu.claflin.finder.log.LogUtil

Used to report problems with the logging engine to the terminal.

results - Variable in class edu.claflin.finder.logic.cygrouper.CytogrouperMain

retainAll(Collection<?>) - Method in class edu.claflin.finder.algo.clustering.struct.girvan_newman_struct.MapBinaryHeap

right - Variable in class edu.claflin.finder.algo.clustering.struct.TreeNode

right - Variable in class edu.claflin.finder.algo.huffman.HuffmanNode

root - Variable in class edu.claflin.finder.algo.clustering.struct.BinarySearchTree

rotateLeft(TreeNode<T>, TreeNode<T>, TreeNode<T>) - Method in class edu.claflin.finder.algo.clustering.struct.BinarySearchTree

rotateRight(TreeNode<T>, TreeNode<T>, TreeNode<T>) - Method in class edu.claflin.finder.algo.clustering.struct.BinarySearchTree

rows - Variable in class edu.claflin.finder.algo.clustering.struct.fast_greedy_struct.SparseMatrix

rows() - Method in class edu.claflin.finder.algo.clustering.struct.fast_greedy_struct.SparseMatrix

get the rows of the matrix

A B C D E F G H I J K L M N O P Q R S T U V W Z
All Classes and Interfaces|All Packages|Constant Field Values|Serialized Form